High-Protein Acorn Squash Breakfast Boats with Warm Apples + Cheesecake Filling

Tender acorn squash breakfast boats filled with a creamy cheesecake-style yogurt filling, warm cinnamon apples, and crunchy pecans. Basically cheesecake for breakfast, but balanced. {Gluten-Free, Dairy-Free Friendly}

An acorn squash halved and topped with vanilla cheesecake filling, warm cinnamon apples. amd pecans on a white plate.

To say I am obsessed with this new breakfast creation is an understatement. The flavors of cinnamon, apples, and maple syrup in the vessel of a squash as a little boat!

If you are looking for a new, unique breakfast to try, this is a great option! It is also packed with protein and fiber. When it comes to fall produce, acorn squash is one of the higher-fiber options.

Two fully assembled acorn squash breakfast boats on a white plate on a brown and white striped towel on a table.

Why I am Loving This Recipe

  • Breakfast in a boat! I mean, how fun is that?
  • Sweet, savory, and ultra creamy.
  • High in both protein and fiber. Translation: it’s very filling and macro-friendly.
  • The warm cinnamon apples make it feel extra cozy.
  • Meal-prep friendly — roast the squash, prep the apples and filling, then assemble when ready.
  • It feels fancy, but it’s actually really simple.
  • A fun way to use seasonal fall produce. Proof that squash doesn’t have to be a lunch/dinner food.
A close-up of a fork with acorn squash, filling, cinnamon apples and pecans on it.

Ingredients

This recipe makes 2 servings. If you want to meal prep for a few days, I recommend doubling the recipe and then storing each component separately for easy assembly!

I tested this recipe with vanilla protein powder and both plain Fage 0% Greek yogurt and vanilla Greek yogurt.

The ingredinets portioned out for the acorn squash boats on a counter.
  • 1 medium acorn squash.
  • 1/2 teaspoon olive oil or avocado oil or cooking spray.
  • Pinch of salt.
  • 1 medium apple, diced.
  • 1 teaspoon butter.
  • 1/2 teaspoon cinnamon, divided.
  • 1/4 cup of softened cream cheese. Or, use an immersion blender to mix.
  • 3/4 cup vanilla or plain Greek yogurt.
  • 1 scoop of vanilla or unflavored protein powder. I used a vanilla protein powder!
  • 2 teaspoons maple syrup, plus more to taste.
  • 2 tablespoons chopped pecans.

Directions

  1. Preheat the oven to 400°F.
  2. Carefully slice the acorn squash in half from stem to bottom. Scoop out the seeds and stringy center with a spoon.
  3. Rub the cut sides lightly with oil or spray with cooking spray and sprinkle with a small pinch of salt. Place the squash cut-side down on a parchment-lined baking sheet.
  4. Roast for 30–40 minutes, or until the flesh is very tender when pierced with a fork. Larger squash may need closer to 45 minutes.
  5. While the squash roasts, melt the butter in a small skillet over medium heat. Add the diced apple and about 1/4 teaspoon cinnamon. Cook for 5–7 minutes, stirring occasionally, until the apples are tender but still hold their shape. If the pan gets dry, add a splash of water. Remove from heat.
  6. Stir together the cream cheese, Greek yogurt, protein powder, remaining cinnamon, and 1 teaspoon maple syrup until creamy. I like to use my immersion blender to combine.
  7. Turn the roasted squash halves cut-side up. Gently fluff some of the squash flesh with a fork while keeping the shell intact.
  8. Divide the cheesecake yogurt mixture between the squash halves (unless meal prepping, see notes). Top each with the warm cinnamon apples, 1 tablespoon chopped pecans, and the remaining maple syrup.
  9. Eat by scooping some of the roasted squash together with the creamy filling and apples in each bite.

Not into eating it straight from the squash? Scoop the roasted squash into a bowl and add the filling and apples on top.

Two squash halves next to a bowl of filling and a bowl of cooked apples for meal prep storage.

To Meal Prep

For meal prep, scoop the roasted squash into individual containers and store the creamy filling separately. Reheat the squash and apples, then top with the filling before eating. Or, store the roasted squash halves in a freezer gallon bag, then keep the ricotta-yogurt filling and apples in separate small containers.

To serve, reheat the squash and apples, then add the cold ricotta mixture, pecans, and maple syrup just before eating.

A close-up of two acorn squash boats stuffed with cheesecake filling and apples on a white plate on a fall towel.

Frequently Asked Questions + Tips

Want 5 full days of protein + fiber already planned for you? Grab my free 5-Day High Protein + Fiber Meal Plan with a complete grocery list. Each day is designed to provide about 100 grams of protein and 25 grams of fiber—use it for meal inspiration or follow it exactly when you need a break from figuring out what to eat.

Get the free meal plan here → High Protein and Fiber Meal Plan.

Increase the Protein

Increase to two scoops of protein powder or add more filling by way of Greek yogurt.

Make it Dairy-Free

Substitute the Greek yogurt with a higher protein, Greek-style plant-based yogurt and dairy-free cream cheese.

More Variation

Swap apples for pears, use pumpkin pie spice instead of cinnamon, or substitute walnuts for pecans. There are plenty of ways to make it your own.

Can I use another type of squash?

Butternut squash can work, but acorn squash is better for the “boat” shape because it has a wider natural cavity.

Can I make it without protein powder?

Yes. The filling will still work without it; it just won’t be as high in protein and may be slightly less thick.

An acorn squash halved and topped with vanilla cheesecake filling, warm cinnamon apples. amd pecans on a white plate.

High-Protein Acorn Squash Breakfast Boats with Warm Apples + Cheesecake Filling

Author: Alex Evink, MS, RD
359kcal
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Prep 10 minutes
Cook 40 minutes
Total 50 minutes
Tender acorn squash breakfast boats filled with a creamy cheesecake-style yogurt filling, warm cinnamon apples, and crunchy pecans. Basically cheesecake for breakfast, but balanced. {Gluten-Free, Dairy-Free Friendly}
Servings 2 breakfast boats
Course Breakfast, Main Course
Cuisine American

Ingredients

  • 1 medium acorn squash
  • ½ teaspoon olive oil or cooking spray
  • 1 medium apple
  • ¾ cup plain or vanilla Greek yogurt
  • 1 scoop of vanilla or unflavored protein powder
  • 1 teaspoon butter
  • ¼ cup softened cream cheese
  • 2 teaspoons maple syrup
  • Pinch of salt
  • ½ teaspoon cinnamon, divided
  • 2 tablespoons chopped pecans

Method

  1. Preheat the oven to 400°F.
  2. Carefully slice the acorn squash in half from stem to bottom. Scoop out the seeds and stringy center with a spoon. Rub the cut sides lightly with oil or spray with cooking spray and sprinkle with a small pinch of salt.
  3. Place the squash cut-side down on a parchment-lined baking sheet. Roast for 30–40 minutes, or until the flesh is very tender when pierced with a fork. Larger squash may need closer to 45 minutes.
  4. While the squash roasts, melt the butter in a small skillet over medium heat. Add the diced apple and about 1/4 teaspoon cinnamon. Cook for 5–7 minutes, stirring occasionally, until the apples are tender but still hold their shape. If the pan gets dry, add a splash of water. Remove from heat.
  5. Stir together the cream cheese, Greek yogurt, protein powder, remaining cinnamon, and 1 teaspoon maple syrup until creamy. I like to use my immersion blender to combine.
  6. Turn the roasted squash halves cut-side up. Gently fluff some of the squash flesh with a fork while keeping the shell intact.
  7. Divide the cheesecake yogurt mixture between the squash halves (unless meal prepping, see notes).
  8. Top each with the warm cinnamon apples, 1 tablespoon chopped pecans, and the remaining maple syrup. Eat by scooping some of the roasted squash together with the creamy filling and apples in each bite.
  9. For meal prep, scoop the roasted squash into individual containers and store the creamy filling separately. Reheat the squash and apples, then top with the filling before eating. Or, store the roasted squash halves in a freezer gallon bag, then keep the ricotta-yogurt filling and apples in separate small containers.

Nutrition

Calories359kcalCarbohydrates45gProtein26.6gFat9.6gSodium300mgFiber9gSugar19g

Notes

Nutritional information is just an estimation and individual ingredients and preparation may lead to slight discrepancies.
Not into eating it straight from the squash? Scoop the roasted squash into a bowl and add the filling and apples on top.
 

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