Healthy Pumpkin Cheesecake Pudding (High Protein)

This delicious yet healthy pumpkin cheesecake pudding is perfect for a fall snack or to satisfy sweet tooth cravings! It’s similar to a pudding that combines the flavors of pumpkin pie and cheesecake. Easy to meal prep and keep in the fridge for the week! {Gluten-Free}

Two glass jars filled with pumpkin cheesecake protein pudding topped with banana slices and chopped pecans.

I love a “healthy” snack that also doubles as dessert. If it’s that good then I really don’t need the ice cream or the cake. Honestly, that’s why I create recipes like this.

Don’t skimp on the toppings here, either – just a bowl of pudding isn’t enough to curb my sweet tooth. I love to add banana slices, whipped cream, and chopped pecans!

Therefore, this is a snack recipe packed with fall flavors that can double as dessert with 14 grams of protein (protein powder is optional) and 4 grams of fiber.

June 2026 update: I changed this recipe after testing it and not really loving the texture. The original recipe was 30 grams of protein. If you add protein powder, this recipe still provides that 30 grams.

A birds-eye view of two jars of protein pudding topped with whipped cream, banana slices, and chopped pecans on a counter decorated with fall decor.

Why I Love This Recipe:

  • Nostalgic fall flavors: maple syrup, pumpkin pie spice, and creamy whipped cream.
  • Curb your sweet tooth in a healthy way. This is a “healthier” pudding alternative that’s rich in omega-3’s, potassium, magnesium, calcium, and vitamin C. Pumpkin is rich in beta-carotene, which has immune-boosting properties – perfect for cold and flu season.
  • Increase overall protein and fiber intake. If you really want to increase overall protein consumption, it’s all about the snacks!
  • Super easy snack prep. Double this recipe, make 4 servings, and have a high protein snack for days! Portable, grab-and-go, easy to take to work. Plus, it helps to curb those dessert cravings. I need something sweet in my everyday life and this just really helps with that craving. It’s like a multi-purpose recipe.
A close-up of the pumpkin cheesecake pudding with protein powder, topped with banana slices, pecans and whipped cream on a fall decorated napkin.

Ingredients

Ingredients for the healthy pumpkin cheesecake pudding on a wood cutting board.

This recipe makes 2 servings. Both the chia seeds and Instant Pudding act as thickeners. If you omit the chia seeds, the pudding will be a little thinner. You can adjust by adding less milk or more pudding mix.

  • 100% Canned Pure Pumpkin Puree (1/2 cup)
  • Instant Jell-O Cheesecake Pudding Mix (1-2 tablespoons)
  • Vanilla Greek yogurt (3/4 cup)
  • Pumpkin Pie Spice (1 teaspoon)
  • Skim Milk (1/2 cup), see notes for dairy-free ideas.
  • Chia Seeds (1-2 tablespoons); the chia seeds help to thicken the pudding and add a little bit of fiber. I recommend sticking to just 1-2 tablespoons.
  • Vanilla Protein Powder (1 scoop, optional). Can sub with unflavored. If you do choose to add protein powder to this recipe, make sure you love the flavor!
  • Vanilla Extract (1/2 tablespoon)
  • Optional: 1–2 Tbsp softened cream cheese for more cheesecake flavor
  • Highly Recommended Toppings: whipped cream, banana slices, chopped pecans, and a drizzle of maple syrup.

Other Topping Ideas

  • Cinnamon apples.
  • Maple syrup drizzle.
  • Any kind of chopped nuts or even pumpkin seeds!
  • Mini chocolate chips.
  • Graham Cracker Crumbs.
  • Hemp hearts to add more protein, especially if omitting the protein powder.

Step-By-Step Directions

Two cheesecake pumpkin puddings in glass jars topped with banana slices and whipped cream next to a fall decorated tray.

This the easiest recipe to throw together! Adjust the consistency with more or less milk and pudding mix.

Create the Pudding Mixture

Add cold milk, pumpkin, Greek yogurt, vanilla extract, chia seeds, instant pudding mix, and pumpkin pie spice to a bowl. Whisk together until smooth and well-combined. Protein powder is totally optional here – just make sure you love the taste and stick to just 1 scoop to prevent that gritty taste.

Refrigerate

Refrigerate for at least 4 hours to allow the chia seeds to thicken the pudding.

Assemble

Separate the mixture into two servings. Top with whipped cream, banana slices, chopped pecans, and a drizzle of maple syrup. Store in an airtight container (best without the banana slices) in the fridge for up to 5 days.

Someone holding a mason jar with protein pudding in it with a golden spoon in it as well.

Add the bananas on top when ready to eat to prevent them from browning.

Frequently Asked Questions

When is a good time to eat this pudding?

Since it’s higher in protein and fiber, this pudding can be eaten as a snack at any time of day. If protein powder is added, it could even be a well-balanced breakfast. I prefer to eat it as an after dinner dessert – that is usually when I have a sweet tooth!

How to Make It Gluten-Free and Dairy-Free?

This recipe is gluten-free as is.

To make this recipe dairy-free, sub the skim with almond milk and fold in dairy-free whipped cream. You could also add more chia seeds to thicken it up.

How Can I Cut Down on the Sweetness?

If you find the pudding too sweet, add about a 1/4 cup of softened cream cheese. You could also add nutmeg, cinnamon or cloves to change the flavor profile.

Two glass jars filled with pumpkin cheesecake protein pudding topped with banana slices and chopped pecans.

Healthy Pumpkin Cheesecake Pudding

Author: Alex Evink, MS, RD
225kcal
5 from 1 vote
Share Print
Prep 5 minutes
4 hours
Total 4 hours 5 minutes
This healthy pumpkin cheesecake pudding makes a delicious healthy snack and can even double as dessert – it's that good! Cozy, comforting flavors and high in protein and fiber. Add in some protein powder and this could be a high protein and fiber well-balanced breakfast. {Gluten-Free, Dairy-Free Friendly}
Servings 2 servings
Course Breakfast, Dessert, Snack
Cuisine American

Ingredients

  • 1/2 cup 100% pure pumpkin puree
  • ¾ cup vanilla Greek yogurt
  • 1/2 cup skim milk see notes
  • 1-2 tablespoons Instant Jell-O Cheesecake Pudding Mix
  • 1-2 tablespoons chia seeds
  • 1/2 tablespoon vanilla extract
  • 1 teaspoon pumpkin pie spice
  • 1 scoop vanilla or unflavored protein powder optional
  • Pinch of salt, optional
Toppings
  • 1 small banana, cut into slices
  • Chopped Pecans
  • Drizzle of maple syrup
  • Whipped Cream

Method

  1. Add milk, pumpkin, Greek yogurt, pudding mix, vanilla extract, chia seeds, pinch of salt and pumpkin pie spice to a bowl. Whisk together until smooth and well-combined.
  2. Refrigerate for at least 4 hours to allow the chia seeds to thicken the pudding.
  3. Separate the mixture into two servings.
  4. Top with whipped cream, banana slices, chopped pecans and enjoy! Store in an airtight container in the fridge for up to 5 days.

Nutrition

Calories225kcalCarbohydrates32.3gProtein14gFat5.7gFiber4.2gSugar22g

Notes

  • If you prefer a thicker consistency, add 1-2 tablespoons of the Instant Pudding Mix after refrigeration. This is especially true if you omit the chia seeds. 
  • To make this recipe dairy-free, sub with a high protein plant-based yogurt and almond milk or coconut milk. If it needs thickening, fold dairy-free whipped topping into it. You could also add more chia seeds/pudding to thicken it up.
Nutritional information is just an estimation and individual ingredients and preparation may lead to small variations. Calculated with no protein powder, one large banana between two servings, and chopped pecans. 
For an addition of one scoop or protein powder: 283 calories, 25g protein.

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